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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Ndg-PA, FBpp0308545
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTFGSKLLA CLLLSSVILV SGQFEHYLDS LRASELYEFE DGSLGSIHLL PKGDSETIVL  60
   61 QLEQPIHFYG EQYEQLYINT NGILTFNSEF PEYLNQPFPL EYASIAAFYS NVDTSFSDEG 120
  121 TSISLFESKE QSILDRASSL VRYAFSSQSE FEARQVIVAT WRNVGYFDSK TDRLNTFQVA 180
  181 LIANEQSTFV QFIYPDGGLN WLQGETAGLG LPDIRAQAGF VAEDGRFYTL NGSGSENARF 240
  241 LSESTNLGVP GVWLFEVAPI ENEQNVRSPD NAESLTESPA LALSCQAHAH QCHEKAECHD 300
  301 KAEGYCCVCG SGFYGNGKSC LANDQPIRVT GTLTGELNKQ PVSEEAKLQS YVVTSEGRTY 360
  361 TTINPLTPEL GAQLRLVLPL LTTVPWLFAK SVGGVANGYQ LTGGVYTHVS RLQFDSGENL 420
  421 HVNQTFEGLN YWDQLSVKIE IYGEVPAVAA DAVLILPDYV EEYTFERPGE LKSVQVLNIN 480
  481 ITEEQRVLGL QVEQRILYRS CLRDDEADPS ATKVLQKISK VALDYVERDQ ALRIGAMSKV 540
  541 GVTPESNACN DGTADCVENS VCVPYEDTYR CDCYHGFAAQ LDERGVEVCL DIDECATGSH 600
  601 VCDENAVCDN TEGGFNCYCT EGFEGNGYRC LSNSTADNIE YPPAVEGQAE PTSEPSPNPS 660
  661 PYPDQGQDQE REREDDQYPQ PNPYPYPEEQ IPQHPDECYR CSKDADCYQG RCTCHEGFDG 720
  721 DGYTCTNICG HGEVWENGRC EPLLLERHDV DPLCDALGEC RCPYGYELSE DSQRCTYVQE 780
  781 FDGERNADLI PCDVDENCHI NATCNWYGQE LRHICTCQPG FRGDGYNCDP ISDDSCAIRP 840
  841 DICDVHADCV YEEHLGKSEC QCQAGYTGNG FNCQLAAECQ SAEHCGENAF CDDGVCRCQA 900
  901 DFERDVSDRC VPAGRCGSVF CGSNAICKWD SAEGVQYCDC LDGYQGDALT GCTSKPLSCH 960
  961 VLNNCGIHAT CEPTEDPANY ECQCIAGFKG DGYVCIEEQN CLNNPTLCDM NAQCRSTNSG1020
 1021 LVCVCNQGFF GNGSLCQERQ HQDSDFLIVS QGVMIARVPL NGRNVRPISV AQMAIGLDKD1080
 1081 CVEGRVYWGD ISTKKIVSTK YDGTDLRPFI TTDIESPEGI AIDVISRRLY WADSAKDTIE1140
 1141 VASLDDPSLR AVIINKQLVN PRGIAVDPYR EKLFWSDWDR ESPKIEMSNL DGTGRELLLG1200
 1201 KDDVTLPNSL VVLENSGEVC YADAGTKKVE CIEPQNRQIR TISNELSYPF GITFTHDQFY1260
 1261 WTDWTTKKVE IVDSLGARQT PIQPPFFGSH KMYGMTVVEQ HCPQYQSPCQ ISNGGCTDSR1320
 1321 LCLVNRQAPS GKSCKCTSAS TGCTVLAPGY 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle