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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: babo-PB
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.92
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSALRLIFL GALLGASVCA SPIEFVMDTS LNGSRSDPAT ATHPGKWPPT TKAPALRAPA  60
   61 GTAGHAYQSP SSSLAADNRS HDNNNASAVS MLLPQDGDAS GAVAPAVTPQ LPIYIAQPSA 120
  121 KKPENKIKCH CDTCKESNNI CETDGFCFTS VEKNSDGSII FSYRCLHKSQ IFPPGRSIWC 180
  181 NDGLHGGPTA RPVGRNGAHA CCKDRDFCNR FLWPKTKDQR SDRVEEGRQI SVQDYVPHRL 240
  241 TSWEFVAIIL GATLFICFTG TSTWYYCQRR KRMASGRTFA KEDSAYDPIL NGNTTIHDII 300
  301 EMTTSGSGSA GLPLLVQRSI ARQVQLCHVI GKGRFGEVWR GRWRGENVAV KIFSSREECS 360
  361 WFREAEIYQT VMLRHENILG FIAADNKDNG TWTQLWLVTD YHENGSLFDY LTTHPVDTNT 420
  421 MLNMSLSIAT GLAHLHMDIV GTRGKPAIAH RDLKSKNILV KSNLSCAIGD LGLAVRHVEK 480
  481 NDSVDIPSTH RVGTKRYMAP EVLDESMNDQ HFDSYKRADV YAFGLILWEI ARRCNMGMIY 540
  541 DEYQLPYYDV VQPDPSIEEM KKVVCIEKCR PNIPNRWHAS DVLHNMAKVM KECWYPNPVA 600
  601 RLTALRIKKT LASISVEDKV KN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle