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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pgant3-PA
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLRFQQLKK LWLLYLFLLF FAFFMFAISI NLYVASIQGG DAEMRHPKPP PKRRSLWPHK  60
   61 NIVAHYIGKG DIFGNMTADD YNINLFQPIN GEGADGRPVV VPPRDRFRMQ RFFRLNSFNL 120
  121 LASDRIPLNR TLKDYRTPEC RDKKYASGLP STSVIIVFHN EAWSVLLRTI TSVINRSPRH 180
  181 LLKEIILVDD ASDRSYLKRQ LESYVKVLAV PTRIFRMKKR SGLVPARLLG AENARGDVLT 240
  241 FLDAHCECSR GWLEPLLSRI KESRKVVICP VIDIISDDNF SYTKTFENHW GAFNWQLSFR 300
  301 WFSSDRKRQT AGNSSKDSTD PIATPGMAGG LFAIDRKYFY EMGSYDSNMR VWGGENVEMS 360
  361 FRIWQCGGRV EISPCSHVGH VFRSSTPYTF PGGMSEVLTD NLARAATVWM DDWQYFIMLY 420
  421 TSGLTLGAKD KVNVTERVAL RERLQCKPFS WYLENIWPEH FFPAPDRFFG KIIWLDGETE 480
  481 CAQAYSKHMK NLPGRALSRE WKRAFEEIDS KAEELMALID LERDKCLRPL KEDVPRSSLS 540
  541 AVTVGDCTSH AQSMDMFVIT PKGQIMTNDN VCLTYRQQKL GVIKMLKNRN ATTSNVMLAQ 600
  601 CASDSSQLWT YDMDTQQISH RDTKLCLTLK AATNSRLQKV EKVVLSMECD FKDITQKWGF 660
  661 IPLPWRM

YRC Informatics Platform - Version 3.0
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