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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: l(2)01289-PB
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFTRLKTLS LLVCALLALS FPGHVSGAGN NNNKKGSQPV APPEPEAVIE EVNAKQLEKL  60
   61 LADKDYVAVF WYARSCVTCD KVLAELEKID DDTDSFGVDF VKINDKRLAK QYGIKNFPAL 120
  121 TYFREKEPII YDGDLMDEEG VLDFLTSLEA MDLPDRIEEV NAKILQKIIE DTDFVAVLFC 180
  181 PDHETCPPRV MDKQQCRKCA KALQELENID DEADQLGIGF VKIHDEALAD EYNLGNLPAL 240
  241 VYYRHQTPII YEGELQREED VLEWLVQNKS TGDEDDVIED VTSKTLSTLI SNIDNLVVLF 300
  301 YDHGNDDSMT VLEELEQIDD DCDKHGIQFV KIDDAKAAAD YGIDSIPAIV YFEKEIPNVY 360
  361 DGDLMDEEQI LKWLLGQLER DEIEDVTDEM LDTMIKEGRV IAVLFYDNND KKSQKVLEEL 420
  421 ENIDDECDAL GITFVKIDNP EEAVEYGINK VPKLIYFEKG IPTIYEGNLE DEEKLLKWLT 480
  481 DQTSSDQIED ITDEMLDLII EKMPHVAVLF YDKDQKKSQK ILAELENIDD ECDQNDIAFV 540
  541 KIDDDKEAKE WGIDEIPSIV LFERGIPHIY EGDLMKEDEL LGWLVHQKRY SEIPEVTDEM 600
  601 KDKLVENTEH LAVIFYDKDD KQDMRILNEL ENIDDELEKE GIVIVRIDNA AEAKEYGLDH 660
  661 LPALIYFENK IPALYEGDLM NEDEVLEWLL VQKKTATIEE VTDEILVTLI NEHEYVVVFF 720
  721 TGPCEPGETC EHTLNALESI DDELDEAGII FVTTEDTGIA KKYNVKTYPR LVFFRNRDPL 780
  781 HFTGDLDDED EVLAWITDDE TLEIPGKIEE VNVKMLDKIL AENDHVVVFF YAEGDKKAQK 840
  841 ILNELENIDD ECEEKDIDFV KTSDDDIDKE YDLPGLPALA FYRHKFRTIY TGDLMKEEEI 900
  901 LEWVIDLHES TADVIESVDR KTLQVLINDV EHLAVFFYDD ECESCSDILE ELENIDDDTD 960
  961 KHGIQFVKSN DVKLAHEIGI FAFPALVYYE TGVPIMYDGN IASNQDVFNW ILEQKADQSI1020
 1021 QLINRDQLFE YIGTKDFLAV VFYKEDDPDS PRVLRHIELI DDEAAEYGIY IVKMHDKLMA1080
 1081 KKYGFRNPPG LTYFRKGKYI NYDGDIDDEE EVLDWLTSPA NMEMTDHIEQ VNRKMFEKIR1140
 1141 KNSDYVAVIF YSDECKQCPR VLAEVEHIDD EADKAGIDFV KIDDKQMAKE YGVFALPAIV1200
 1201 FFKPTSKEPV IYAGDLYEEE QILTWLITQK DPSGDVIEDL EGERLVHLIE ESGSIAVYFY1260
 1261 ADGCEQCTKV LEELENIDDD CDKHGITFVK TRDFSVADGY GVHEYPALVY FEGGIPNVFE1320
 1321 GELSEEEEVL QWLITQKTED RIELITRQML ETMVEETQYL AVYFYKINCN ICDQILEGLE1380
 1381 LIDDECDVFG IHMVKIQDPQ LAKRYSIKTF PALVYFRNGN PLLFEGDLQN EQSVLEWLID1440
 1441 DDNRELADEI EEVNERMLDR LMAESTLLVV FFYDDDCAEC EEILEELEEI DGEADMFGID1500
 1501 FVKIASIQAA KKYEIVNIPS LVYFRKQVPV LYDGDLHQHD KVITWLTSQD VFEIKNEIEE1560
 1561 VNRKMLDKLL EENEFLAVFF YEHNQPDSTA ALEKLENIDS ETDNLDITFV KMADSRYAKK1620
 1621 WGVTKLPAMV YFRRRFPSIY RGDLLSEDEV LEWLRKNRFR QPELNIFMYA LIALAVAFVV1680
 1681 YTAFLLQCFK PAPPPPVQHP KQS

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