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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: tkv-PD
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPKSRKKKA HARSLTCYCD GSCPDNVSNG TCETRPGGSC FSAVQQLYDE TTGMYEEERT  60
   61 YGCMPPEDNG GFLMCKVAAV PHLHGKNIVC CDKEDFCNRD LYPTYTPKLT TPAPDLPVSS 120
  121 ESLHTLAVFG SIIISLSVFM LIVASLCFTY KRREKLRKQP RLINSMCNSQ LSPLSQLVEQ 180
  181 SSGSGSGLPL LVQRTIAKQI QMVRLVGKGR YGEVWLAKWR DERVAVKTFF TTEEASWFRE 240
  241 TEIYQTVLMR HDNILGFIAA DIKGNGSWTQ MLLITDYHEM GSLHDYLSMS VINPQKLQLL 300
  301 AFSLASGLAH LHDEIFGTPG KPAIAHRDIK SKNILVKRNG QCAIADFGLA VKYNSELDVI 360
  361 HIAQNPRVGT RRYMAPEVLS QQLDPKQFEE FKRADMYSVG LVLWEMTRRC YTPVSGTKTT 420
  421 TCEDYALPYH DVVPSDPTFE DMHAVVCVKG FRPPIPSRWQ EDDVLATVSK IMQECWHPNP 480
  481 TVRLTALRVK KTLGRLETDC LIDVPIKIV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle