YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0307126, aph...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLPEFFGCT FIAFGPPFAL FVFTIANDPV RIIILIAAAF FWLLSLLISS LWYALIPLKE  60
   61 FLAFGVVFSV CFQEAFRYII YRILRSTEQG LHAVAEDTRV TDNKHILAYV SGLGFGIISG 120
  121 MFALVNVLAD MSGPGTMGLK GGTELFFVTS AAQALSIILL HTFWSVIFFN AFDTNNYIHI 180
  181 GYVVFSHLFV SLITLLNANE LYTTTLLINY LVTILTGVLA FRVAGGTSRS FRKFITCQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.76
Transmembrane Helix	6	26	0.90
Cytoplasmic	27	31	0.74
Transmembrane Helix	32	55	0.91
Non-Cytoplasmic	56	60	0.71
Transmembrane Helix	61	81	0.79
Cytoplasmic	82	105	0.91
Transmembrane Helix	106	129	0.89
Non-Cytoplasmic	130	144	0.90
Transmembrane Helix	145	168	0.87
Cytoplasmic	169	177	0.74
Transmembrane Helix	178	198	0.92
Non-Cytoplasmic	199	205	0.75
Transmembrane Helix	206	225	0.96
Cytoplasmic	226	238	0.91