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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AIF-PB
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIWGVRCLT QRFIRQAYIL ANRRLLGPVP QRSPPAYAPL RPAHSSLYQM VKKRTLEART  60
   61 KLQANKYPNH QVCVTKPSTT PPVEEYETAV EGAGVPAYAN AQFQAHSQSE PLFKVGFADV 120
  121 KSVCSAKDVL KSDSAKLSTS QPVLDSCKAT SPCEEFKRKR KETTCQPCDE DGTAPGGGDG 180
  181 GDEECECRMK DLRLKCLLGA LAALLAGGFL AWFMTRDTDD SEAKKAEAEE EERKRRLVAG 240
  241 LATSPPSSED LPKHVPYLII GGGTAAFSAF RAIKSNDATA KVLMISNEFR KPYMRPPLSK 300
  301 ELWYTPNPNE DPIKDYRFKQ WTGSERSLFF EPDEFFIDPE DLDDNANGGI AVAQGFSVKK 360
  361 VDAQKRIVTL NDGYEISYDE CLIATGCAPK NLPMLRDAPP SVLEKVMVYR TPDDFDRLRK 420
  421 LAAEKRSITI VGNGFIGSEL ACSLAHYSRE NNGGKVYQVF QENANMSKVL PNYLSRWTTA 480
  481 KMEAQGVCVI PNASIRSAVR DETNLKLELN NGMTLMSDVV VVCVGCTPNT DLAGPSRLEV 540
  541 DRSLGGFVVN AELEARRNLY VAGDASCFFD PLLGRRRVEH HDHSVVSGRL AGENMTGAKK 600
  601 PYQHQSMFWS DLGPEIGYEG IGLVDSSLPT VGVFALPSES ATRVDQLSES SDSDVPETST 660
  661 SSSQSSKSDA GASQDGVTCD PDEAGNYGKG VIFYLKNDKI VGILLWNLFN RIGLARTIIN 720
  721 QNKKYDDLNE VAKLFEIHA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle