YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RFeSP-PA
Protein type:	Transmembrane
Type Confidence:	0.62
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNAVSRAYV RGGAQVLSTG LKASGVAVNS MANRQAHTDL QVPDFSAYRR ESVKDSRRRN  60
   61 DTAEERKAFS YLMVGAGAVG GAYAAKGLVN TFIGSMSASA EVLAMAKIEI KLSDIPEGKS 120
  121 VTFKWRGKPL FIRHRTAAEI ETERNVPTST LRDPEADDVG TVEWVDSLML LPISSLATCD 180
  181 QARVAGGHRS VHASGLCAHR ERRRLGWLLL PLPRLPLRRL RKDPQGTRAP QLGGAHPRVP 240
  241 QRGSSRGRLE ELLSFKPPTA

Type	Start	End	Confidence
Cytoplasmic	1	67	0.58
Transmembrane Helix	68	85	0.58
Non-Cytoplasmic	86	260	0.93