YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SOMA_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAADSQTPWL LTFSLLCLLW PQEAGAFPAM PLSSLFANAV LRAQHLHQLA ADTYKEFERA  60
   61 YIPEGQRYSI QNAQAAFCFS ETIPAPTGKE EAQQRTDMEL LRFSLLLIQS WLGPVQFLSR 120
  121 IFTNSLMFGT SDRVYEKLKD LEEGIQALMQ ELEDGSPRIG QILKQTYDKF DANMRSDDAL 180
  181 LKNYGLLSCF KKDLHKAETY LRVMKCRRFA ESSCAF

Type	Start	End	Confidence
Signal Peptide	1	26	0.98
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	216	0.99