YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BAX_RAT
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.24
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGSGEQLGG GGPTSSEQIM KTGAFLLQGF IQDRAGRMAG ETPELTLEQP PQDASTKKLS  60
   61 ECLRRIGDEL DSNMELQRMI ADVDTDSPRE VFFRVAADMF ADGNFNWGRV VALFYFASKL 120
  121 VLKALCTKVP ELIRTIMGWT LDFLRERLLV WIQDQGGWDG LLSYFGTPTW QTVTIFVAGV 180
  181 LTASLTIWKK MG

Type	Start	End	Confidence
Cytoplasmic	1	106	0.57
Transmembrane Helix	107	122	0.24
Non-Cytoplasmic	123	167	0.71
Transmembrane Helix	168	188	0.81
Cytoplasmic	189	192	0.67