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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SAC1_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.10
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATAYEHLK LHITPEKFYV EACDDGADDV LIIDRVSTEV TLAVKKDVPP SAVTRPIYGI  60
   61 MGTIHLVAGN YLVVITKKMK VGEFFNHVIW KATDFDVLSY KKTMLHLTDI QLQDNKTFLA 120
  121 MLNHVLSTDG FYFSTTYDLT HTLQRLSNTS PEFQEMSLLE RADQRFVWNG HLLRELSAQP 180
  181 EVHRFALPVL HGFITMHSCS INGKYFDWIL ISRRSCFRAG VRYYVRGIDS EGHAANFVET 240
  241 EQIVHYSGNR ASFVQTRGSI PVFWSQRPNL KYKPDPQINK VANHMDGFQR HFDSQVIIYG 300
  301 KQVIINLVNH KGSEKPLEQT FAKMVSSLGS GMIRYIAFDF HKECKNMRWD RLSILLDQVA 360
  361 EMQDELSYFL VDSAGKVVTN QEGVFRSNCM DCLDRTNVIQ SLLARRSLQA QLQRLGVLHV 420
  421 GQKLEEQDEF EKIYKNAWAD NANACAKQYA GTGALKTDFT RTGKRTQLGL VMDGFNSLLR 480
  481 YYKNNFSDGF RQDSIDLFLG NYSVDELDSH SPLSVPRDWK FLALPIIMVV AFSMCIICLL 540
  541 MAGDTWTETL AYVLFWGVAS IGTFFIILYN GKDFVDAPRL VQKEKID

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle