YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LIF_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVLAAGIVP LLLILHWKHG AGSPLPITPV NATCAIRHPC HGNLMNQIKS QLAQLNGSAN  60
   61 ALFISYYTAQ GEPFPNNVDK LCAPNMTDFP PFHANGTEKT KLVELYRMVT YLGASLTNIT 120
  121 WDQKNLNPTA VSLQIKLNAT TDVMRGLLSS VLCRLCNKYH VGHVDVPCVP DNSSKEAFQR 180
  181 KKLGCQLLGT YKQVISVLAQ AF

Type	Start	End	Confidence
Signal Peptide	1	20	0.98
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	202	0.99