YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EREG
Protein type:	Transmembrane
Type Confidence:	0.63
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAGRRMEML CAGRVPALLL CLGFHLLQAV LSTTVIPSCI PGESSDNCTA LVQTEDNPRV  60
   61 AQVSITKCSS DMNGYCLHGQ CIYLVDMSQN YCRCEVGYTG VRCEHFFLTV HQPLSKEYVA 120
  121 LTVILIILFL ITVVGSTYYF CRWYRNRKSK EPKKEYERVT SGDPELPQV

Type	Start	End	Confidence
Cytoplasmic	1	9	0.62
Transmembrane Helix	10	30	0.55
Non-Cytoplasmic	31	117	0.97
Transmembrane Helix	118	141	0.92
Cytoplasmic	142	169	0.98