YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IZH2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTLLERTKS VQELKKRAAG KTSANPAEVA KAKKVLRRLY SWDEIPEWQR DNDFILHGYV  60
   61 KETSSFIETF KSLFYLHNES VNIYSHLIPA LGFFTVLLLD KSTIKVFATT TWLDHMVIDL 120
  121 FYSGAFACLI LSSSFHCLKS HSLRIATLGN KLDYLGICIL IVTSMVSILY YGYFEKFSLF 180
  181 CLFALITVSF GIACSIVSLK DKFRKREWRP YRAGLFVCFG LSSIIPIFSG LYCYSFSEIW 240
  241 TQIQLFWVLL GGVLYIIGAV LYGMRFPEKI CPGKFDIWGH SHQLFHFLVV IAALCHLRGL 300
  301 LNSYELVHIK MENGIVS

Type	Start	End	Confidence
Cytoplasmic	1	80	0.96
Transmembrane Helix	81	99	0.88
Non-Cytoplasmic	100	117	0.80
Transmembrane Helix	118	138	0.91
Cytoplasmic	139	151	0.89
Transmembrane Helix	152	173	0.91
Non-Cytoplasmic	174	178	0.82
Transmembrane Helix	179	199	0.95
Cytoplasmic	200	212	0.87
Transmembrane Helix	213	234	0.92
Non-Cytoplasmic	235	242	0.84
Transmembrane Helix	243	264	0.93
Cytoplasmic	265	283	0.86
Transmembrane Helix	284	301	0.88
Non-Cytoplasmic	302	317	0.87