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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ATH1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRIRSLWFN AEASYSNLNN SPSLRNKNST GNNSRSKNYR SFSRFDLINS ILLLMMLFLL  60
   61 AIFVTALYLT KSSRLTYSHA SRAALFNPLG VISPSLGNHT LNYDPEARES SKKLYELLSD 120
  121 FNTAYYDDEN MILGSNLFSK NTYSRQPYVA NGYIGSRIPN IGFGYALDTL NFYTDAPGAL 180
  181 NNGWPLRNHR FAGAFVSDFY CLQPKLNSTN FPELDDVGYS TVISSIPQWT NLQFSLVNDS 240
  241 KWFNPQNVTL DDVTNYSQNL SMKDGIVTTE LDWLNSQIHV KSEIWAHRHI HPLGVVSLEI 300
  301 SLNTDHLPSD FDSLDVNIWD ILDFNTSHRT VLHSTGTDEK NNAVFMIVQP DNVPSSNCAI 360
  361 YSTCTVKYEN STNPINSSES FEEKDVSSNI YNVILTEDQP KIIVHKYVGI MSTEFNKNKE 420
  421 QQDNTNIGLA KMIALNSKGN YEKLLSSHKR AWYDLYNDAF IEIPSDSLLE MTARSSLFHL 480
  481 LANTRDYNVS SDRGLPVGVS GLSSDSYGGM VFWDADIWME PALLPFFPNV AQNMNNYRNA 540
  541 THSQAKLNAE KYGYPGAIYP WTSGKYANCT STGPCVDYEY HINVDVAMAS FSIYLNGHEG 600
  601 IDDEYLRYTT WPIIKNAAQF FTAYVKYNSS LGLYETYNLT DPDEFANHIN NGAFTNAGIK 660
  661 TLLKWATDIG NHLGEVVDPK WSEISKDIYI PRSSSNITLE YSGMNSSVEI KQADVTLMVY 720
  721 PLGYINDESI LNNAIKDLYY YSERQSASGP AMTYPVFVAA AAGLLNHGSS SQSYLYKSVL 780
  781 PYLRAPFAQF SEQSDDNFLT NGLTQPAFPF LTANGGFLQS ILFGLTGIRY SYEVDPDTKK 840
  841 INRLLRFNPI ELPLLPGGIA IRNFKYMNQV LDIIIDDHNG TIVHKSGDVP IHIKIPNRSL 900
  901 IHDQDINFYN GSENERKPNL ERRDVDRVGD PMRMDRYGTY YLLKPKQELT VQLFKPGLNA 960
  961 RNNIAENKQI TNLTAGVPGD VAFSALDGNN YTHWQPLDKI HRAKLLIDLG EYNEKEITKG1020
 1021 MILWGQRPAK NISISILPHS EKVENLFANV TEIMQNSGND QLLNETIGQL LDNAGIPVEN1080
 1081 VIDFDGIEQE DDESLDDVQA LLHWKKEDLA KLIEQIPRLN FLKRKFVKIL DNVPVSPSEP1140
 1141 YYEASRNQSL IEILPSNRTT FTIDYDKLQV GDKGNTDWRK TRYIVVAVQG VYDDYDDDNK1200
 1201 GATIKEIVLN D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle