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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VTC3
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFGIKLAND VYPPWKDSYI DYERLKKLLK ESVIHDGRSS VDSWSERNES DFVEALDKEL  60
   61 EKVYTFQISK YNAVLRKLDD LEENTKSAEK IQKINSEQFK NTLEECLDEA QRLDNFDRLN 120
  121 FTGFIKIVKK HDKLHPNYPS VKSLLQVRLK ELPFNNSEEY SPLLYRISYL YEFLRSNYDH 180
  181 PNTVSKSLAS TSKLSHFSNL EDASFKSYKF WVHDDNIMEV KARILRHLPA LVYASVPNEN 240
  241 DDFVDNLESD VRVQPEARLN IGSKSNSLSS DGNSNQDVEI GKSKSVIFPQ SYDPTITTLY 300
  301 FDNDFFDLYN NRLLKISGAP TLRLRWIGKL LDKPDIFLEK RTFTENTETG NSSFEEIRLQ 360
  361 MKAKFINNFI FKNDPSYKNY LINQLRERGT QKEELEKLSR DFDNIQNFIV EEKLQPVLRA 420
  421 TYNRTAFQIP GDQSIRVTID SNIMYIREDS LDKNRPIRNP ENWHRDDIDS NIPNPLRFLR 480
  481 AGEYSKFPYS VMEIKVINQD NSQMPNYEWI KDLTNSHLVN EVPKFSLYLQ GVASLFGEDD 540
  541 KYVNILPFWL PDLETDIRKN PQEAYEEEKK TLQKQKSIHD KLDNMRRLSK ISVPDGKTTE 600
  601 RQGQKDQNTR HVIADLEDHE SSDEEGTALP KKSAVKKGKK FKTNAAFLKI LAGKNISENG 660
  661 NDPYSDDTDS ASSFQLPPGV KKPVHLLKNA GPVKVEAKVW LANERTFNRW LSVTTLLSVL 720
  721 TFSIYNSVQK AEFPQLADLL AYVYFFLTLF CGVWAYRTYL KRLTLIKGRS GKHLDAPVGP 780
  781 ILVAVVLIVT LVVNFSVAFK EAARRERGLV NVSSQPSLPR TLKPIQDFIF NLVGE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle