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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TRE2
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSSYQPVST TNFEHENAIP TASSSHNLLM SQRFDDSPPS SNDNSIETNI TPPPEPPSYE  60
   61 FDIEDPHDDL HKRTHLQRVS IGFQEKILEP LMENIIHPLL QISKFVPDKA DYYLSKIGNP 120
  121 FILRRFFYII FMSFIAYYVL SSGYLFNEKA SGSKGMFSQH DILFEYAKKS VDLAKFERDL 180
  181 EYISSMPHGS GTKGDAAIYR YIQESFDNNG LKLVKEMGYS VYSNYPGNVS ISYYDNKNEK 240
  241 HDLELSKENF NPLSSNGKLS KVSLIYGGKG TTYDLQHLKD SKTIEDGKDY VLLLQYDKLV 300
  301 SQQVLIAEKF GAKAVIFISE PYGENIDVVQ SKPVGLPQYS TGDASGLNWD GSPVEEKDHK 360
  361 FWRQTHIPTI PISTRQGKEL LSRLSSGGVT VDDGNSDRSN SGKMGDVLID VDLQTNVREK 420
  421 HFIPNIVGKI EGREQSDKAI IIAASRNSIN FGTTYPNFGT AALLSIVQLF QEVKYKFGWK 480
  481 PLRNIYFISF GGTEFNYAGS SELVEQRLTP LKDEIYSLID ISQLGIPFAE KYENGKTRGE 540
  541 LSIETHPLLK KFFNRNAHGN FDISVDNVQH YGDWTPFLAN GIPVSVISSD STRNRDTPTE 600
  601 TSEDKFERVE KILEDEQNQQ SVKDLLVYLL HISMELIDDP LLHFDIISYV EDIDERLQRL 660
  661 EQAYPEKLNF TSIIKGLLFW KKIGSEWASW TQGWENIVWS HGDGIEPSLL SINRWTWNKK 720
  721 LTNIGRRTCS PAGLPNRSFY KNVLFGPTLI QEDKSKNGGN VDFWTFPGVM DAIYDDDWKR 780
  781 AQEQIDLIGK VLHQSAALFV EETNDIGYK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle