YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IZH2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHVGEESFQ MSTLLERTKS VQELKKRAAG KTSANPAEVA KAKKVLRRLY SWDEIPEWQR  60
   61 DNDFILHGYV KETSSFIETF KSLFYLHNES VNIYSHLIPA LGFFTVLLLD KSTIKVFATT 120
  121 TWLDHMVIDL FYSGAFACLI LSSSFHCLKS HSLRIATLGN KLDYLGICIL IVTSMVSILY 180
  181 YGYFEKFSLF CLFALITVSF GIACSIVSLK DKFRKREWRP YRAGLFVCFG LSSIIPIFSG 240
  241 LYCYSFSEIW TQIQLFWVLL GGVLYIIGAV LYGMRFPEKI CPGKFDIWGH SHQLFHFLVV 300
  301 IAALCHLRGL LNSYELVHIK MENGIVS

Type	Start	End	Confidence
Cytoplasmic	1	90	0.96
Transmembrane Helix	91	109	0.88
Non-Cytoplasmic	110	127	0.80
Transmembrane Helix	128	148	0.91
Cytoplasmic	149	161	0.89
Transmembrane Helix	162	183	0.91
Non-Cytoplasmic	184	188	0.82
Transmembrane Helix	189	209	0.95
Cytoplasmic	210	222	0.87
Transmembrane Helix	223	244	0.92
Non-Cytoplasmic	245	252	0.84
Transmembrane Helix	253	274	0.93
Cytoplasmic	275	293	0.86
Transmembrane Helix	294	311	0.88
Non-Cytoplasmic	312	327	0.87