YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COQ2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIWQRKSIL LGRSILGSGR VTVAGIIGSS RKRYTSSSSS SSSPSSKESA PVFTSKELEV  60
   61 ARKERLDGLG PFVSRLPKKW IPYAELMRLE KPVGTWLLYL PCSWSILMGA MMQGATLSAT 120
  121 AGMLGIFGVG ALVMRGAGCT INDFLDRKLD QRVIRSVERP IASGRVSPRR ALVFLGAQTL 180
  181 VGMGVLSLLP AQCWWLGLAS LPIVFTYPLF KRFTYYPQAA LSACFNWGAL LGFPAMGVMS 240
  241 WPTMIPLYLS SYLWCMTYDT IYAHQDKKFD IKAGIKSTAL AWGPRTKSIM KAMSASQIAL 300
  301 LAVAGLNSGL LWGPGFIGGL GVFAYRLFSM IKKVDLDNPK NCWKYFNANI NTGLYFTYAL 360
  361 AVDYILRLFG FL

Type	Start	End	Confidence
Cytoplasmic	1	94	0.82
Transmembrane Helix	95	115	0.84
Non-Cytoplasmic	116	122	0.57
Transmembrane Helix	123	145	0.82
Cytoplasmic	146	165	0.96
Transmembrane Helix	166	189	0.78
Non-Cytoplasmic	190	192	0.57
Transmembrane Helix	193	210	0.74
Cytoplasmic	211	222	0.53
Transmembrane Helix	223	245	0.84
Non-Cytoplasmic	246	297	0.69
Transmembrane Helix	298	328	0.72
Cytoplasmic	329	344	0.73
Transmembrane Helix	345	366	0.60
Non-Cytoplasmic	367	372	0.48