YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ESBP6
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	209	0.97
Transmembrane Helix	210	234	0.84
Non-Cytoplasmic	235	253	0.89
Transmembrane Helix	254	275	0.90
Cytoplasmic	276	282	0.71
Transmembrane Helix	283	303	0.86
Non-Cytoplasmic	304	312	0.63
Transmembrane Helix	313	334	0.89
Cytoplasmic	335	340	0.79
Transmembrane Helix	341	361	0.91
Non-Cytoplasmic	362	372	0.83
Transmembrane Helix	373	393	0.94
Cytoplasmic	394	421	0.86
Transmembrane Helix	422	445	0.81
Non-Cytoplasmic	446	457	0.68
Transmembrane Helix	458	477	0.71
Cytoplasmic	478	490	0.70
Transmembrane Helix	491	510	0.93
Non-Cytoplasmic	511	517	0.72
Transmembrane Helix	518	540	0.92
Cytoplasmic	541	552	0.82
Transmembrane Helix	553	574	0.92
Non-Cytoplasmic	575	583	0.86
Transmembrane Helix	584	605	0.94
Cytoplasmic	606	673	0.96

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTHSNDYFS ASSGMVSETS SEVSSINSSQ PVSFSKASIA APVPCSDLHS TKSNDASRKL  60
   61 SISRTLTNRL NDIKKAVDDD NLQTEENSAD VNKILESRFD VADAIRLQHN ESVQSKLNIP 120
  121 VTHTTTAGAS LSAPSSSAFS ASSIQNDTTE HKASMDSKLM RNRLYPASTK HSGKDLEAQG 180
  181 ITEFEPDEPT VKKVFTNKST GQLELPPDGG YGWVVTFCVF LTMFSTWGCN ASFGVDLAYY 240
  241 LNHDTYPGAS KYDYALIAGL TVFLGQLLSP LVMALMRIIG LRTTMLFGDA VMLAAYLLAS 300
  301 FTTKLWQLYV TQGFMVGCSI SLIFVPATTV LPGWFLKKRA VAMGVSLLGT GAGGVVYGLA 360
  361 TNKMLSDFGN TRWCLRIIGI SCSISVLVAI ALLKERNPTP AIGLKSPRAM FEQLKAMFSL 420
  421 KVITKPFVVL IALWFMFALF AYNMMVFTLS SYAISKGLSS HDASTLTAIL NGSQSIGRPL 480
  481 MGLAGDKFGR ANVTIVLTTL LTIYMFAFWI PAHTFVQLIF FSILVGSCVG VANVMNTVLI 540
  541 ADMVKPEEFL PAWAFVNYCG APFLLVCEVI AQALTVEKDK SNPYLHAQIF CGCCFIAALI 600
  601 LISILREYSI RMKLTERQAM TNEKLKEWKA SEYDTDSADE DWGKLKERKT KYDLLLGPGI 660
  661 KKYFLRMVYP MKV