YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CUE1
Protein type:	Transmembrane
Type Confidence:	0.67
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDSRLLITL ILVFGVIFLK KFFQSNQHPS AQRLSATGVN AHGRPQGSTQ NALRRTGRVN  60
   61 GGHPVTTQMV ETVQNLAPNL HPEQIRYSLE NTGSVEETVE RYLRGDEFSF PPGFEPSRAP 120
  121 MGANAAVDNN AAGGGEFNDP RKKNMICAEN LLDKFHVDLN EDMSNLSFKD LDIEERKRLL 180
  181 VWQARKNLET KLQSDKDLQS LLT

Type	Start	End	Confidence
Cytoplasmic	1	5	0.51
Transmembrane Helix	6	23	0.65
Non-Cytoplasmic	24	203	0.87