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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MSC1
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQFKLVNAV SASFVLIGLV LANSDSVFDK WTQEDLADYL RDNKKSLEKY ATDSIEDLKT  60
   61 EASQVWDKHA QPKPWWQVWS SDSSSVSNSN PGWFGYTGSS DHPVSDWLFD TWSTDSLRNF 120
  121 LKKNGVDVDD AKASKDSLVK TAKENFNKIS KSLKSSGYYP SSSYFDSWST KDLQNWLNDN 180
  181 GIDYDKAVQS KDELVQKVKE NIYRTSEKAE QQRLGLLESL DLAHQQILDT SGQIKDTVFD 240
  241 KWSSDQLTNW LESHKVNIDK NMAKKHDYLV RMAKENSANL KDDIYWYLDY MKRESSPFLT 300
  301 KTPEYVGSVW DSSKNFLTNL YSKFRGKTDN VINDTFLVGL DSWPKDKLKM FLDARGIKYS 360
  361 MLSTEHQLRE LVKKSRNEKL KILPKDYQKY FDNSNWSLDD IKGWFADKKD DFQDSQTYST 420
  421 IMQDFDKVSK NTNDAKDQIA KTWSNTFQSW SQEDLLQYLK SFGVPVKQTS TKDDLINLAK 480
  481 QNTQWLFGTV KEPAYKRYLH NVKNWSKSIL GFN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle