YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HMX1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRHGFIYRQG ILAYYYVFDA IEQEIDRLLN DPVTEEELQT STILKQFWLE DFRRSTQIYK  60
   61 DLKLLYSNTF KSTESLNEFL ATFQKPPLLQ QFINNIHENI HKEPCTILSY CHVLYLALFA 120
  121 GGKLIRSNLY RRLGLFPNFE KLSQKELVKK GTNFFTFSDL GPTEETRLKW EYKKNYELAT 180
  181 RTELTEAQKL QIISVAEGIF DWNFNIVAEI GELNRRELMG KFSFKCITYL YEEWMFNKDS 240
  241 ATRRALHTVM LLVLSIIAIW VLYFLVKSFL SIV

Type	Start	End	Confidence
Cytoplasmic	1	244	0.81
Transmembrane Helix	245	266	0.92
Non-Cytoplasmic	267	273	0.77