YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PHS1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKLASPLS FLPLYNLLSA VGWSYLLYLV ISLYPKVGQP AFFYQTKNVA TLVQCGAIIE  60
   61 IINSFLGVVR SPLLTTVAQV SSRLLVVLGI FQLLPNTSGV QSVVYISLLL AWSITEIVRY 120
  121 LYYFFMLVFK NGAPKILILL RYNLFWILYP TGVASELRII YCALNAAESQ YSLLYKRILI 180
  181 AAMLAYIPGF PMLFLHMVAQ RKKVMKSLRS SFGKKLI

Type	Start	End	Confidence
Cytoplasmic	1	10	0.89
Transmembrane Helix	11	32	0.89
Non-Cytoplasmic	33	49	0.80
Transmembrane Helix	50	69	0.78
Cytoplasmic	70	75	0.62
Transmembrane Helix	76	95	0.74
Non-Cytoplasmic	96	102	0.66
Transmembrane Helix	103	123	0.87
Cytoplasmic	124	141	0.72
Transmembrane Helix	142	162	0.81
Non-Cytoplasmic	163	177	0.83
Transmembrane Helix	178	199	0.94
Cytoplasmic	200	217	0.97