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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG34120-PC
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVHLNGREV RELLRKDLLV RWRQKGLSLI LLAWPVMVFM LLYLIRLKYG SEELEACQYP  60
   61 TRLLPTKNQV VPAAFSYICS IENRCQPAHP YEEYSHWKEA PLHSVIDVVN AFVTDERLHK 120
  121 AVVELAEKAN FVSAITTLIT SDRFDIIRSN ISEIISLVPE IERRMNYSFD IKHLFSNRET 180
  181 FVKLGVLLCG HPFPNTDTIP LVNEILESED FSQANDAEID AMPTRRRRRY EDLPTDWRPT 240
  241 KYCKRLYRDV TSTNQGKLTW NTIKPIIQGR ILYTPANAMT ESVVKFSNAS FEELDRLKQL 300
  301 SRAAATILTK LHTNATFQEA FDNLLKLAKS PLVKSLVGDD FDIGEIERVF EYIRTNQLIY 360
  361 DILTTVADLM DCVSADRFEA VESVEELHKR AYELNQNKLF LAALNLEDVG LKQASYRLHM 420
  421 DTDNTQPTFE NRNRFWFPGP ADSMVIDLKY HRGFVQLKQM VDLGIIKSKR EEAGFAPEED 480
  481 GPESGRSLSG LFSIKQVEND TPDEDDDDFD LSLEESGDEK AAPKVSASAS DHEATTISPS 540
  541 SLDGVTTEEV RVTTEQTVVS GDPDLLLLKN EDVLKRSKRQ GLFDLLGGFG GSGDANKKNK 600
  601 FEVDNMQFYT KQFPYPAFLN DVFKRGLYLA QGVQVAYLLG LVVFVALSVR ERIWMRESRN 660
  661 SMLMRSMGLK AHSELVAWAL MSFLELCVIF ALISGVLYSG GILGYTNWFF MMFYCLSFGL 720
  721 CLISFCYMCT NFFNSANIGA VASALLFFIS LCPFIIVLMF DAKLSVFESF LVDLSFTTAF 780
  781 AKGWGELIRM ELQQEGLTVR HLIQVGPARS ECAMALLMFL LDLLLYAVIG LAYQRYKKNN 840
  841 YSFVKVSRSQ LDGKLGASLV NVSKLYGSKC AVSNLSLDFA RNQVSCLLGR NGAGKSTLIK 900
  901 LLTGQIRQSS GKVLLAGEHQ VGVCWQDNIL IPTLTAREHL QLYAQIKIPP GGSGGVEEIR 960
  961 SEVAQTLQSL NFGKHESYPS WQLSGGYRRR LCVAIAFIAS PSVVILDEPC NGVDAKARKD1020
 1021 IWQLIERLRQ GRAVIFATHF MDEAKYLSDS LVIMRNGRII AQHSRDSLQR LCTSNYSIRL1080
 1081 RCADATGVTF VIQKAQQLLP QTQVTHSGAA DYPHSLTINA SYAEHLTPGA VEFLELLQSQ1140
 1141 VTAGSISDVE LTTSSSLEQE FEQLNRNGED AGPRRPASDR SGVVAGPAMI TDEPPTACKQ1200
 1201 FRLLMGKRLR HLSRNYRLLL YVLLLPALFE LCAMWFVSYR LEDDFDTVLP LSRSLYPQTA1260
 1261 QFLSHERATS FSEKLYPQLR TSCDHLGECR VFNTSQQSYD WVLNSWGEYS ERRYGGYGLN1320
 1321 GSGATVWYNN KGYHSMMAWL NDLNSELLRT TMNDSESSIL TLNEPWKLGF AELSTSSILR1380
 1381 QAGDGSMVFI LLIAFGLVVA SGSVYLVNER VNGEKLQQRL CGVSAVTYWL VALVWDYLVM1440
 1441 VLGLIVCLVV ILMFGMPVFV DRQQLVGIIG LSLAFSFACV PSVHVAEKIF SDSSIAIVSI1500
 1501 FCANLIVPLV TMGIILILGV VGDGPAWDDW RHALNQAFLI FPIHALGDGF LELCKNYMVA1560
 1561 LVFRRYDIDS YKHPLASDLL GRHFTALLLV GVAALIINVL IEWHLLRRLW QRVERLLDCT1620
 1621 YRRELDKLGQ LKLVNIQSIF KSCVDTGEAV RAENLWLAYR RGHYAVRNVN FSVQRGECFG1680
 1681 LLGKNGAGKS TIFKLLTGQL QPDVGQIYFE QPGISYCPQS NPLDPLLTTT ECIRFYGRLR1740
 1741 GIRDLDQFLD RVLDTYELRP YKDVQVRNLS GGNRRKLTVA VTCCGCTPTV LMDEPTSDMD1800
 1801 PVTRDMVYAT IEQLLLARRA VVLTSHSVSE IEHLCQRVAV LRAGQVIASD SPQRLKSEHG1860
 1861 GYYAVTCFCG PAQQAILSRS LNQRLPGARD LQHYAHSLRF LVRVRSPGSL GDAPLLSELF1920
 1921 AILCDVCVNV ARFSLSRCRF ETVFERILDS SESNGSNGVH KDQQQQVAKN DLPSKSPAVG1980
 1981 GTLETGYIHC GYEETRT

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