YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PRP18
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLDLASILK GEISKKKKEL ANSKGVQPPC TEKFQPHESA NIDETPRQVE QESTDEENLS  60
   61 DNQSDDIRTT ISKLENRPER IQEAIAQDKT ISVIIDPSQI GSTEGKPLLS MKCNLYIHEI 120
  121 LSRWKASLEA YHPELFLDTK KALFPLLLQL RRNQLAPDLL ISLATVLYHL QQPKEINLAV 180
  181 QSYMKLSIGN VAWPIGVTSV AFMLVVHIRK FKEAGMLLT

Type	Start	End	Confidence
Cytoplasmic	1	154	0.58
Transmembrane Helix	155	170	0.42
Non-Cytoplasmic	171	188	0.71
Transmembrane Helix	189	208	0.85
Cytoplasmic	209	219	0.66