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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GDA1
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPIFRNYRF AIGAFAVIML ILLIKTSSIG PPSIARTVTP NASIPKTPED ISILPVNDEP  60
   61 GYLQDSKTEQ NYPELADAVK SQTSQTCSEE HKYVIMIDAG STGSRVHIYK FDVCTSPPTL 120
  121 LDEKFDMLEP GLSSFDTDSV GAANSLDPLL KVAMNYVPIK ARSCTPVAVK ATAGLRLLGD 180
  181 AKSSKILSAV RDHLEKDYPF PVVEGDGVSI MGGDEEGVFA WITTNYLLGN IGANGPKLPT 240
  241 AAVFDLGGGS TQIVFEPTFP INEKMVDGEH KFDLKFGDEN YTLYQFSHLG YGLKEGRNKV 300
  301 NSVLVENALK DGKILKGDNT KTHQLSSPCL PPKVNATNEK VTLESKETYT IDFIGPDEPS 360
  361 GAQCRFLTDE ILNKDAQCQS PPCSFNGVHQ PSLVRTFKES NDIYIFSYFY DRTRPLGMPL 420
  421 SFTLNELNDL ARIVCKGEET WNSVFSGIAG SLDELESDSH FCLDLSFQVS LLHTGYDIPL 480
  481 QRELRTGKKI ANKEIGWCLG ASLPLLKADN WKCKIQSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle