YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TLG1
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNSEDPFQQ VVKDTKEQLN RINNYITRHN TAGDDDQEEE IQDILKDVEE TIVDLDRSII  60
   61 VMKRDENEDV SGREAQVKNI KQQLDALKLR FDRRIQESTQ TTIPLEETVE NSTLNTSMAE 120
  121 NNDGGMSNPF QEQMLREQDV HLDGIHKTMQ NLHIQAQTMG DELENQGQLL DNMDEGMDGV 180
  181 VNKLARGRRQ LEWVYEKNKE KYDDCCIGLL IVVLIVLLVL AFIA

Type	Start	End	Confidence
Cytoplasmic	1	204	0.90
Transmembrane Helix	205	223	0.90
Non-Cytoplasmic	224	224	0.98