YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GPI19
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYTKEYYWFS QYMIITSTLV LTIIWSILPS SLGEAAPKQF INTLLDIFPQ RRWIITLESI  60
   61 MLMGMLCTYI GLLMYNEDTL TPPLDSLSTV TDAGGQLVIE DDPDVFVKKW AFKETSGIYD 120
  121 LSLMDACQLL YLYDNDHTST

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.57
Transmembrane Helix	8	33	0.81
Cytoplasmic	34	52	0.56
Transmembrane Helix	53	75	0.88
Non-Cytoplasmic	76	140	0.59