YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ERS1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSLDDILGI VYVTSWSISM YPPIITNWRH KSASAISMDF VMLNTAGYSY LVISIFLQLY  60
   61 CWKMTGDESD LGRPKLTQFD FWYCLHGCLM NVVLLTQVVA GARIWRFPGK GHRKMNPWYL 120
  121 RILLASLAIF SLLTVQFMYS NYWYDWHNSR TLAYCNNLFL LKISMSLIKY IPQVTHNSTR 180
  181 KSMDCFPIQG VFLDVTGGIA SLLQLIWQLS NDQGFSLDTF VTNFGKVGLS MVTLIFNFIF 240
  241 IMQWFVYRSR GHDLASEYPL

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.70
Transmembrane Helix	7	25	0.69
Cytoplasmic	26	39	0.78
Transmembrane Helix	40	62	0.87
Non-Cytoplasmic	63	81	0.93
Transmembrane Helix	82	105	0.87
Cytoplasmic	106	117	0.92
Transmembrane Helix	118	139	0.93
Non-Cytoplasmic	140	150	0.83
Transmembrane Helix	151	171	0.79
Cytoplasmic	172	184	0.84
Transmembrane Helix	185	207	0.85
Non-Cytoplasmic	208	226	0.82
Transmembrane Helix	227	247	0.92
Cytoplasmic	248	260	0.95