YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SUL1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.37
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	97	0.90
Transmembrane Helix	98	113	0.47
Non-Cytoplasmic	114	119	0.43
Transmembrane Helix	120	142	0.77
Cytoplasmic	143	151	0.46
Transmembrane Helix	152	175	0.64
Non-Cytoplasmic	176	204	0.56
Transmembrane Helix	205	226	0.91
Cytoplasmic	227	233	0.46
Transmembrane Helix	234	256	0.82
Non-Cytoplasmic	257	289	0.57
Transmembrane Helix	290	314	0.67
Cytoplasmic	315	332	0.46
Transmembrane Helix	333	356	0.73
Non-Cytoplasmic	357	391	0.38
Transmembrane Helix	392	410	0.37
Cytoplasmic	411	460	0.57
Transmembrane Helix	461	487	0.75
Non-Cytoplasmic	488	521	0.47
Transmembrane Helix	522	554	0.64
Cytoplasmic	555	859	0.52

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRKSSTEYV HNQEDADIEV FESEYRTYRE SEAAENRDGL HNGDEENWKV NSSKQKFGVT  60
   61 KNELSDVLYD SIPAYEESTV TLKEYYDHSI KNNLTAKSAG SYLVSLFPII KWFPHYNFTW 120
  121 GYADLVAGIT VGCVLVPQSM SYAQIASLSP EYGLYSSFIG AFIYSLFATS KDVCIGPVAV 180
  181 MSLQTAKVIA EVLKKYPEDQ TEVTAPIIAT TLCLLCGIVA TGLGILRLGF LVELISLNAV 240
  241 AGFMTGSAFN IIWGQIPALM GYNSLVNTRE ATYKVVINTL KHLPNTKLDA VFGLIPLVIL 300
  301 YVWKWWCGTF GITLADRYYR NQPKVANRLK SFYFYAQAMR NAVVIVVFTA ISWSITRNKS 360
  361 SKDRPISILG TVPSGLNEVG VMKIPDGLLS NMSSEIPASI IVLVLEHIAI SKSFGRINDY 420
  421 KVVPDQELIA IGVTNLIGTF FHSYPATGSF SRSALKAKCN VRTPFSGVFT GGCVLLALYC 480
  481 LTDAFFFIPK ATLSAVIIHA VSDLLTSYKT TWTFWKTNPL DCISFIVTVF ITVFSSIENG 540
  541 IYFAMCWSCA MLLLKQAFPA GKFLGRVEVA EVLNPTVQED IDAVISSNEL PNELNKQVKS 600
  601 TVEVLPAPEY KFSVKWVPFD HGYSRELNIN TTVRPPPPGV IVYRLGDSFT YVNCSRHYDI 660
  661 IFDRIKEETR RGQLITLRKK SDRPWNDPGE WKMPDSLKSL FKFKRHSATT NSDLPISNGS 720
  721 SNGETYEKPL LKVVCLDFSQ VAQVDSTAVQ SLVDLRKAVN RYADRQVEFH FAGIISPWIK 780
  781 RSLLSVKFGT TNEEYSDDSI IAGHSSFHVA KVLKDDVDYT DEDSRISTSY SNYETLCAAT 840
  841 GTNLPFFHID IPDFSKWDV