YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TSC10
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFTLEDQVV LITGGSQGLG KEFAKKYYNE AENTKIIIVS RSEARLLDTC NEIRIEAHLR  60
   61 RETTDEGQVQ HKLAAPLDLE QRLFYYPCDL SCYESVECLF NALRDLDLLP TQTLCCAGGA 120
  121 VPKLFRGLSG HELNLGMDIN YKTTLNVAHQ IALAEQTKEH HLIIFSSATA LYPFVGYSQY 180
  181 APAKAAIKSL VAILRQELTN FRISCVYPGN FESEGFTVEQ LTKPEITKLI EGPSDAIPCK 240
  241 QACDIIAKSL ARGDEDVFTD FVGWMIMGMD LGLTAKKSRF VPLQWIFGVL SNILVVPFYM 300
  301 VGCSWYIRKW FRENDGKKAN

Type	Start	End	Confidence
Non-Cytoplasmic	1	284	0.71
Transmembrane Helix	285	307	0.87
Cytoplasmic	308	320	0.81