YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FLR1
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	103	0.99
Transmembrane Helix	104	124	0.92
Non-Cytoplasmic	125	137	0.81
Transmembrane Helix	138	159	0.88
Cytoplasmic	160	170	0.83
Transmembrane Helix	171	192	0.90
Non-Cytoplasmic	193	197	0.71
Transmembrane Helix	198	220	0.88
Cytoplasmic	221	230	0.75
Transmembrane Helix	231	253	0.92
Non-Cytoplasmic	254	260	0.89
Transmembrane Helix	261	282	0.93
Cytoplasmic	283	339	0.96
Transmembrane Helix	340	361	0.85
Non-Cytoplasmic	362	375	0.72
Transmembrane Helix	376	397	0.91
Cytoplasmic	398	414	0.82
Transmembrane Helix	415	436	0.92
Non-Cytoplasmic	437	445	0.67
Transmembrane Helix	446	467	0.86
Cytoplasmic	468	474	0.75
Transmembrane Helix	475	497	0.85
Non-Cytoplasmic	498	510	0.85
Transmembrane Helix	511	533	0.92
Cytoplasmic	534	548	0.93

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYTSTYRHT IVVDLLEYLG IVSNLETLQS AREDETRKPE NTDKKECKPD YDIECGPNRS  60
   61 CSESSTDSDS SGSQIEKNDP FRVDWNGPSD PENPQNWPLL KKSLVVFQIM LLTCVTYMGS 120
  121 SIYTPGQEYI QEEFHVGHVV ATLNLSLYVL GYGLGPIIFS PLSETARYGR LNLYMVTLFF 180
  181 FMIFQVGCAT VHNIGGLIVM RFISGILCSP SLATGGGTVA DIISPEMVPL VLGMWSAGAV 240
  241 AAPVLAPLLG AAMVDAKNWR FIFWLLMWLS AATFILLAFF FPETQHHNIL YRRALKLRKE 300
  301 TGDDRYYTEQ DKLDREVDAR TFLINTLYRP LKMIIKEPAI LAFDLYIAVA YGCFYLFFEA 360
  361 FPIVFVGIYH FSLVEVGLAY MGFCVGCVLA YGLFGILNMR IIVPRFRNGT FTPEAFLIVA 420
  421 MCVCWCLPLS LFLFGWTARV HWILPVISEV FFVLAVFNIF QATFAYLATC YPKYVASVFA 480
  481 GNGFCRASFA CAFPLFGRAM YDNLATKNYP VAWGSSLVGF LTLGLAIIPF ILYKYGPSLR 540
  541 TRSSYTEE