YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PTH2
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITSFLMEKM TVSSNYTIAL WATFTAISFA VGYQLGTSNA SSTKKSSATL LRSKEMKEGK  60
   61 LHNDTDEEES ESEDESDEDE DIESTSLNDI PGEVRMALVI RQDLGMTKGK IAAQCCHAAL 120
  121 SCFRHIATNP ARASYNPIMT QRWLNAGQAK ITLKCPDKFT MDELYAKAIS LGVNAAVIHD 180
  181 AGRTQIAAGS ATVLGLGPAP KAVLDQITGD LKLY

Type	Start	End	Confidence
Cytoplasmic	1	15	0.68
Transmembrane Helix	16	36	0.84
Non-Cytoplasmic	37	214	0.85