YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPO7
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPESIGDVG NHAQDDSASI VSGPRRRSTS KTSSAKNIRN SSNISPASMI FRNLLILEDD  60
   61 LRRQAHEQKI LKWQFTLFLA SMAGVGAFTF YELYFTSDYV KGLHRVILQF TLSFISITVV 120
  121 LFHISGQYRR TIVIPRRFFT STNKGIRQFN VKLVKVQSTW DEKYTDSVRF VSRTIAYCNI 180
  181 YCLKKFLWLK DDNAIVKFWK SVTIQSQPRI GAVDVKLVLN PRAFSAEIRE GWEIYRDEFW 240
  241 AREGARRRKQ AHELRPKSE

Type	Start	End	Confidence
Cytoplasmic	1	70	0.99
Transmembrane Helix	71	91	0.92
Non-Cytoplasmic	92	105	0.79
Transmembrane Helix	106	126	0.93
Cytoplasmic	127	259	0.98