YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AI4
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQRWLYSTN AKDIAVLYFM LAIFSGMAGT AMSLIIRLEL AAPGSQYLHG NSQLFNVLVM  60
   61 PALIGGFGNY LLPLMIGATD TAFPRINNIA FWVLPMGLVC LVTSTLVESG AGTGWTVYPP 120
  121 LSSIQAHSGP SVDLAIFALH LTSISSLLGA INFIVTTLNM RTNGMTMHKL PLFVWSIFIT 180
  181 AFLLLLSLPV LSAGITMLLL DRNFNTSFFE VSGGGDPILY EHLFWFFGQT VATIIMLMMY 240
  241 NDMHFSKCWK LLKKWITNIM STLFKALFVK MFMSYNNQQD KMMNNTMLKK DNIKRSSETT 300
  301 RKMLNNSMNK KFNQWLAGLI DGDGYFGIVS KKYVSLEITV ALEDEMALKE IQNKFGGSIK 360
  361 LRSGVKAIRY RLTNKTGMIK LINAVNGNIR NTKRLVQFNK VCILLGIDFI YPIKLTKDNS 420
  421 WFVGFFDADG TINYSFKNNH PQLTISVTNK YLQDVQEYKN ILGGNIYFDK SQNGYYKWSI 480
  481 QSKDMVLNFI NDYIKMNPSR TTKMNKLYLS KEFYNLKELK AYNKSSDSMQ YKAWLNFENK 540
  541 WKNK

Type	Start	End	Confidence
Cytoplasmic	1	13	0.99
Transmembrane Helix	14	36	0.93
Non-Cytoplasmic	37	56	0.84
Transmembrane Helix	57	77	0.90
Cytoplasmic	78	88	0.85
Transmembrane Helix	89	111	0.89
Non-Cytoplasmic	112	135	0.89
Transmembrane Helix	136	156	0.95
Cytoplasmic	157	171	0.87
Transmembrane Helix	172	198	0.85
Non-Cytoplasmic	199	221	0.91
Transmembrane Helix	222	241	0.93
Cytoplasmic	242	254	0.82
Transmembrane Helix	255	273	0.71
Non-Cytoplasmic	274	544	0.78