YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AI3
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQRWLYSTN AKDIAVLYFM LAIFSGMAGT AMSLIIRLEL AAPGSQYLHG NSQLFNVLVM  60
   61 PALIGGFGNQ KRYESNNNNN QVMENKEYNL KLNYDKLGPY LAGLIEGDGT ITVQNSSSMK 120
  121 KSKYRPLIVV VFKLEDLELA NYLCNLTKCG KVYKKINRNY VLWTIHDLKG VYTLLNIING 180
  181 YMRTPKYEAF VRGAEFMNNY INSTTITHNK LKNMDNIKIK PLDTSDIGSN AWLAGMTDAD 240
  241 GNFSINLMNG KNRSSRAMPY YCLELRQNYQ KNSNNNNINF SYFYIMSAIA TYFNVNLYSR 300
  301 ERNLNLLVST NNTYKTYYSY KVMVANTYKN IKVMEYFNKY SLLSSKHLDF LDWSKLVILI 360
  361 NNEGQSMKTN GSWELGMNLR KDYNKTRTTF TWSHLKNTYL ENK

Type	Start	End	Confidence
Cytoplasmic	1	13	0.69
Transmembrane Helix	14	36	0.90
Non-Cytoplasmic	37	403	0.73