YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AI2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQRWLYSTN AKDIAVLYFM LAIFSGMAGT AMSLIIRLEL AAPGSQYLHG NSQLFNVLVV  60
   61 GHAVLMIFCA PFRLIYHCIE VLIDKHISVY SINENFTVSF WFWLLVVTYM VFRYVNHMAY 120
  121 PVGANSTGTM ACHKSAGVKQ PAQGKNCPMA RLTNSCKECL GFSLTPSHLG IVIHAYVLEE 180
  181 EVHELTKNES LALSKSWHLE GCTSSNGKLR NTGLSERGNP GDNGVFMVPK FNLNKVRYFS 240
  241 TLSKLNARKE DSLAYLTKIN TTDFSELNKL MENNHNKTET INTRILKLMS DIRMLLIAYN 300
  301 KIKSKKGNMS KGSNNITLDG INISYLNKLS KDINTNMFKF SPVRRVEIPK TSGGFRPLSV 360
  361 GNPREKIVQE SMRMMLEIIY NNSFSYYSHG FRPNLSCLTA IIQCKNYMQY CNWFIKVDLN 420
  421 KCFDTIPHNM LINVLNERIK DKGFMDLLYK LLRAGYVDKN NNYHNTTLGI PQGSVVSPIL 480
  481 CNIFLDKLDK YLENKFENEF NTGNMSNRGR NPIYNSLSSK IYRCKLLSEK LKLIRLRDHY 540
  541 QRNMGSDKSF KRAYFVRYAD DIIIGVMGSH NDCKNILNDI NNFLKENLGM SINMDKSVIK 600
  601 HSKEGVSFLG YDVKVTPWEK RPYRMIKKGD NFIRVRHHTS LVVNAPIRSI VMKLNKHGYC 660
  661 SHGILGKPRG VGRLIHEEMK TILMHYLAVG RGIMNYYRLA TNFTTLRGRI TYILFYSCCL 720
  721 TLARKFKLNT VKKVILKFGK VLVDPHSKVS FSIDDFKIRH KMNMTDSNYT PDEILDRYKY 780
  781 MLPRSLSLFS GICQICGSKH DLEVHHVRTL NNAANKIKDD YLLGRMIKMN RKQITICKTC 840
  841 HFKVHQGKYN GPGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle