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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108862099, gi...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPWTRCSCC LTESGSLPSA CFTNSRKSRP LPKSHQRVHP KSIHESLPHS NCLPPPSKSN  60
   61 LSSHLRRFRH APSTPRSILS PPIRSNPQLG STNCKGLGAD WSMGLRSPNS MLWLVLLVWA 120
  121 ALLCGSCHGR FVVEKNSLKV TSPSDMKGTY ECAIGNFGVP QYGGTMVGVV AYPKANKKAC 180
  181 KSFDDFDISY KAKPGSLPTF LLVDRGDCFF TKKAWNAQNA GAAAILVADD KTEPLITMDT 240
  241 PEESGNTDYL ENITIPSALI TKSFGDKLKK AIDNGDMVNV NLDWRESLPH PDERVEYEFW 300
  301 TNSNDECGPK CDSQIDFVKS FKGAAQVLEK KGYTQFTPHY ITWYCPDSFI LSKQCKSQCI 360
  361 NHGRYCAPDP EQDFSKGYDG KDVVVQNLRQ VCVYKVAKEH GKPWLWWDYV TDFAIRCPMK 420
  421 EKKYTKECAD GVIKSLGLDH KAIDKCIADP DADKENPVLK AEQDAQIGKG SRGDVTILPT 480
  481 LVINNRQYRG KLDKGAVLKA ICAGFRETTE PAVCLSEDIQ TNECLENNGG CWQDKAANIS 540
  541 ACKDTFRGRV CECPVVKGVK FVGDGYTHCE ASGSGHCEIN NGGCWKDSRH GRTYSACTND 600
  601 GCKCPDGFKG DGVHKCEDID ECKERTACQC KECKCKNTWG SYECGCSGGL LYMKEHDTCI 660
  661 SKNAATEVGW NFLWVIFFGL VVAGIAGYAV YKYRIRRYMD SEIRAIMAQY MPLDNQGDVP 720
  721 NHSHHIEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle