YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125559330
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTALACLAGK AISWSSGVKA AAGCGLGLLP QWRGVFRSVR MESGSSQGGR GALIVLEGLD  60
   61 RSGKSSQCAR LLSFLQGKGC QAEGWRFPDR GTSVGQMISA YLANESELDD RTIHLLFSAN 120
  121 RWEKRALMER KLLGGTTLIV DRYSYSGVAF SAAKGLDIEW CKAPENGLIA PDLVVYLDVQ 180
  181 PEKAAERGGY GGERYEKIEF QKKVGEHYHS LRDSTWKVVD GSLPMEVVEE QLKELAMSCI 240
  241 LECQSKQLAS LAW

Type	Start	End	Confidence
Signal Peptide	1	20	0.87
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	253	0.98