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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE40355
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHQPSRRRRP PREVERPSAT IRYEPVAEPE PWCSFCSWDL ILILLVMLGA GCFILLHLYL  60
   61 YPNLEKVAPL PNIDPENAPY TWGTYRPHMY FGLRTRSPMS PLFGMMWYEQ PNTIQRPHIR 120
  121 HWCNQDDRLP GYYWYEADGR HFGKQNISEA HKGVIQTDWI NDANGFAARV KLNMAPGRRY 180
  181 NVILYLSAQE IGTRFRLGKH LSDVFHGYNE LLGKFTMSLR LKDNTKLQTS HSVMLTDEKI 240
  241 PIDRYHDFVV DNTQAYNAPN QPLNYILNEK HNDEEGKFIA VQLNLGSQAE FDIILQTEKL 300
  301 KGMKPEEFTN ILRIRSYNFN KKYENVFQLA GKNYTKTQLK MAKVSLSNML GSVGYWYGHN 360
  361 RVLFNGIVQP YGPHVLFSAV PSRPFFPRGF LWDEGFHQML IRKMDSKMTL EAIASWMNAM 420
  421 DTSGWIPREM IVGSEAEAKV PAEFIPQKND VANPPTLFYV MDKLVNDEKT VGRYAGILKL 480
  481 LYPRLEKWFH WIRITQSGPT RTTYRWRGRN ETIKTELNPK TLSSGLDDFP RASHPSDLEY 540
  541 HLDLRCWLAL ASRVLNRLAK SYGTDADYQR TAKAMEELNN FDSLVKDHWS EEAQGFFDYG 600
  601 KHSFDVALSP VPTPGSPRQF EYQRVTSRAP SYTLVSDAFG YNNLFPMMLK LIPSKSPILK 660
  661 SMLDKIRDPK ILWTNYGLRS ISRSSPYYMA RNTEHDPPYW RGYIWINVNY MVLSSLRHYA 720
  721 DQPGPYRENA ENIFSELRAN LVKNLATQFQ KTGFLWENYD DRTGEGRGCH PFTGWSSLIL 780
  781 LIMSDNLDT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle