YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	unc-49
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVLTETHLM TGTNRRLPPV AYVKAVDVFL GFCYLLVILA LIEYACVAYS KKKNEDRRRR  60
   61 EKKTEHKPAP PTPDILHDVR LAECTCNAAP TSIIAVIKQS NRFCVSHSHI DIVSRAAFPL 120
  121 VFILFNTLFW LILLYKSKRL PYISEHEGDR CDAPDLH

Type	Start	End	Confidence
Cytoplasmic	1	19	0.58
Transmembrane Helix	20	42	0.78
Non-Cytoplasmic	43	111	0.57
Transmembrane Helix	112	134	0.86
Cytoplasmic	135	157	0.58