YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56679848, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTISVGLTES RETPMLKTTT AIALALIATS AIAEGELNLY SSRHYDTDER LYTDFEEATG  60
   61 IRINRIEGKA DELIARMQAE GANSPADVLL TVDTSRLARA KEAGLLQAID SAVLEDRIPA 120
  121 NLQDSDNQWF GFSQRARLYF YDKAGVSAPP ATYLDLADPA YKGQVCIRSS TNTYNQTLLA 180
  181 AIITHHGEDV ARDWAESVVA NMAREPQGGD TDQLRGIVSG ECGIAVSNSY YFARALRSDV 240
  241 KGLSGEIDKI GIAFPSQDAE GAHMNLSGGG VAAHAPNRDN AVKFLEYLAS DQAQVYFSNG 300
  301 NDEYPAVTGV DLADNVAALG EFKADEVNLS EVAANIPMAQ KIFNEVGWK

Type	Start	End	Confidence
Signal Peptide	1	33	0.94
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	349	0.99