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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62484308, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLLQRIANW ASDNRDGNVA DKATADAAKL NRKESYKAQR KNYRREKKRV ASELMNSLQD  60
   61 PAVIVLADWL KVRGTLKSWT KLWCVLKPGL LLIYKSQKTK SSHWVGTVML TSCQVIERPS 120
  121 KKDGFCFKLF HPLEQSIWAP RGPDKETIGA VVQPLPTAYL IFRAPSQAAG KCWMDALELS 180
  181 LRCSALLLRS NSSTGTAPTS SYIGEPLPVS HETQWSEADY EKHFNDHDLD ADSQNEAPNA 240
  241 VMSGLESESE SDPAEPAQDD VVDQQCVETS YVPFTEEEFG EQGEQVEELA EENKSLIWCI 300
  301 VKQVRPGMDL SKVVLPTFIL EPRSFLDKLS DSYYHADLLS KAVQEDDAFT RMKLVVQWYL 360
  361 SSFYKKPKGL KKPYNPILGE RFRCYWQHPS GSRTFYIAEQ VSHHPPVSAF YVTNREDGFS 420
  421 ITCSILAKSK FYGNSTSAVL EGAATMTLLP RGECYTATTP YAHCKGILMG TLSMELGGKI 480
  481 NIECENTGYR TELEFKLKPF LGGADATNVV VGKIKLGKET LATINGHWDK ECRVKDSKTG 540
  541 EETVLFKVDA ETRSKRLTRY MVPLDLQEAN ESQRLWQRVS EAIANEDQVA ATEEKTVLEE 600
  601 RQRADAKERL SSDSVHMPDL FELDSYGQWL YKYADLRPWD SRNDVRQYEC QFKVLTQTRH 660
  661 KSVPIVHGAE MIHPLRSSIE TLSRTQRQSP AGQPLPPGGS AVPKAKNKSL VLAPRDTNSD 720
  721 SSQSPQGAVK RSSSSAIKQL ALAVDQVNRV LEQHTRQLNE ISQRLERMQY SPPPSSMSAH 780
  781 SLHMLGGGVS QSTVIKSLIY ALIGLAFSLI LRWLFK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle