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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85725020, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLHSDPSMQ VHFDDVSLYG TPKEEPMPNI PIVSEKVSAN FLKSQLQSWF QPTDNRLAMK  60
   61 LFGSRKALVK ERIRQKTSGH WVIHPCSSFR FYWDLCMLLL LVANLIILPV AISFFNDDLS 120
  121 TRWIAFNCLS DTIFLIDIVV NFRTGIMQQD NAEQVILDPK LIAKHYLRTW FFLDLISSIP 180
  181 LDYIFLIFNQ DFSDSFQILH AGRALRILRL AKLLSLVRLL RLSRLVRYVS QWEEVYFLNM 240
  241 ASVFMRIFNL ICMMLLIGHW SGCLQFLVPM LQGFPSNSWV SINELQESYW LEQYSWALFK 300
  301 AMSHMLCIGY GRFPPQSLTD MWLTMLSMIS GATCYALFLG HATNLIQSLD SSRRQYREKV 360
  361 KQVEEYMAYR KLPRDMRQRI TEYFEHRYQG KFFDEELILG ELSEKLREDV INYNCRSLVA 420
  421 SVPFFANADS NFVSDVVTKL KYEVFQPGDI IIKEGTIGTK MYFIQEGVVD IVMANGEVAT 480
  481 SLSDGSYFGE ICLLTNARRV ASVRAETYCN LFSLSVDHFN CVLDQYPLMR KTMETVAAER 540
  541 LNKIGKNPNI MHQKDEQLSN PESNTITAVV NALAAEADDC KDDDMDLKEN LLHGSESSIA 600
  601 EPVQTIREGL PRPRSGEFRA LFEGNTP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle