YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57237601, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLCLSVCA IGLLASNAIS QNVELDSSII SASGFAQDIK EAPATINVIS KKELQSKPYR  60
   61 DVAEAIADIP GVDLYASKGK TGSYNITMRG ITGYTLVLID GRRQGIGGEV GPNGFNEISN 120
  121 SFLPPISSIE RIEVIKGPMS TLYGSEALGG VVNIITKKVS DKWETSVSLD ALLNENKDWG 180
  181 NTYGTSIYSS GPLMNDKLGL TLRFREFYRQ QSNVEFTNGS GQRVPGDQAQ SPTKANNFNI 240
  241 GTRVSYLAND YNTFIFDIDF SRNHYDNKQG QLGTITSPDS TQGSLTGGYA DIMEVDKFVT 300
  301 YLSHEGVYEN FSITSGLQYN RVSNDGREVV GQATQPFLGE NRDIVAEDII LDTKSVIPLG 360
  361 QNHILSAGGE YRLEKMQDKI ANPTNFDQYL LAIFAEDEYS IKDNLRLTFG ARYNHHEIFG 420
  421 NNVSPRAYLV YNPTDELTLK GGVSTGFRTP YANRLINGAY NYSGQGRFPI YGNPDLKEET 480
  481 SLNYEIAAIY NNDLFYVSAT GFLTNFKDKI STQRYDKNNM IPGIGTCNAD RCFRAINHGK 540
  541 VEYKGVELGA GISPLDNLNI NFAYTYLDSE VKEAQDKSVI GKPEQDSLKH NIMLKTEYSF 600
  601 YNKITPWIKG EWQIDRYMGD TNINREYYKD IFLASMGVRY DINKQWNINA AIYNLFNKSF 660
  661 TDGWESYQNS GTTTWVNTYN RIEEGRRIYI SINGSF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle