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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cng-3
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTHSAQKLP NLHERKRRMS KKPDDDDLIP QHFEYENQYE KWRAANPRIE YDFSVDESGY  60
   61 IYWIWTFFVV CGCLYNIIVL SVLAFENIRY AYIEKILPIN IAFDTVFLFD IILRSMLSFY 120
  121 EDGVLITSFS ETWRHYVHSF YFAIDLLAIF PFDYLLIRKT SAAFCRLNRF LKIYRIANFI 180
  181 AQSYGKLTQV TISLSKIFTA CFLLFHVNAC VFYIISVNSD TSSWDGVNAT FDDDEYLPWP 240
  241 YTPEKITDAY FVGCDGRTDC YNPYFYYDEA REDHLVELYH FWRTDNRTHI YNFSQFTKEY 300
  301 TLSMYWSAMT MTTLGEQPAP NTSLQNAFEI VNTLAGLLLF AVIMGSIGDL VANANAVKTF 360
  361 WQTLMDGLKQ YMTYRNLNER LQTKVLKYCE YEMAEETIMK EHEVRDELPA KLYGHVTTSI 420
  421 IGASLVRSPL FRASERSFLN DISQLLEPHY FCPGDVVIEK GQLCSSMFII VCGQMVEITE 480
  481 DNEIDHFEGE ILGDVNLIWF NNHLNHNRHQ HNVISSAFSQ IHMLSRDDFF KVLSSYDPKL 540
  541 KRRLCDVAFY LQRQRGELDD KKRCLSENED IESNLKRLAI DTLELHDKMT EMEEEFWDFS 600
  601 ATAKRKLFES EMVVCDLLNN SQRRSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle