YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	unc-49
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSDAYSTAE IEYKWCTSKE PNCSTAVKAD ANIELSSYKF TKICQKRTLA STSSGTYSRL  60
   61 RVSFIFDRDS GFYFLQIFFP ASLVVVLSWI SFWINRDSAP SRTLIGTMTV LTETHLMTGT 120
  121 NRRLPPVAYV KAVDVFLGFC YLLVILALIE YACVAYSKKK NEDRRRREKK TEHKPAPPTP 180
  181 DILHDVRLAE CTCNAAPTSI IAVIKQSNRF CVSHSHIDIV SRAAFPLVFI LFNTLFWLIL 240
  241 LYKSKRLPYI SEHEGDRCDA PDLH

Type	Start	End	Confidence
Cytoplasmic	1	70	0.83
Transmembrane Helix	71	93	0.92
Non-Cytoplasmic	94	134	0.75
Transmembrane Helix	135	157	0.86
Cytoplasmic	158	218	0.80
Transmembrane Helix	219	241	0.85
Non-Cytoplasmic	242	264	0.74