YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113623405, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSDPWMK EYNEASRLAD DINSMIADRG SLPQSGPEII RHTSAIRRKI TILCTRLDSL  60
   61 EALLSKIPPK SLSDKELHKR QDTLSNLKSK TKQMATSFNM SNFANREDLL GQNKKAADDM 120
  121 SRVAGLDNQG IVGLQRQIMK EQDEGLEKLE ETVLSTKHIA LAVNEELTLH TRLIDDLEDH 180
  181 VDVTNSRLQR VQKRLAILNK RTKGGCSCMC LLLSVVAIVI LAVIVWLLIK YM

Type	Start	End	Confidence
Cytoplasmic	1	204	0.96
Transmembrane Helix	205	229	0.89
Non-Cytoplasmic	230	232	0.90