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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|19881576, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTPGAGAAA AGGDGAPGAR GGAPGSGGGA ANNNTNGGNS ASQSSGGPFS GYILLLLLFL  60
   61 LLALYCFVPV PDVHDTFSIL LCYCYVPVPD IHSYVPIHDA HDSILLVMLH VSTRSPYTVY 120
  121 AMIIVLTFWI KICRFMAIFP TIQKPDRSFS VVGFAAALKP HAFDGSNYKR WKARALLWLT 180
  181 AMQCFYVSRG KRSEPPLSSE EEAKFEASDC LFQGALISVL ADNIVDVYMH MPSGKDMWDA 240
  241 LEAKFGVSDA GSELYVMEQF YDYKMVDDRS VVEQAHEIQM LAKELENNNC ELPDKFVAGG 300
  301 IIAKLPPSWS DFATSLKHKR QEFSVSDLIG SLGVEEKARA KDVRGKKVKG GSSANMVQKK 360
  361 NPHASHNNKK VKLYVKPKAA TNFKKKGKGK AKGDCFVCGK SGHWAKDCPE RKDRKSANMV 420
  421 ISEGGGTSGC GKILPTVLSV FHSPNWWVDT GANIHVGRGS SLLMGNGSLA AVHGVGTVDL 480
  481 KFTSGKTVQL KNV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle